Data analysis service
data analysis service
Cancer bioinformatics and systems biology service
Contact
has contact
has_contact
Okimoto, Gordon
Related Resource
provides access to
provides_access_to
Dell PowerEdge 2900 III server
Service Provided by
service provided by
service_provided_by
Informatics Shared Resource
http://www.crchbioinfo.org/
Website(s)
has URL
has_url
The ISR provides expertise in the design and programming of bioinformatics tools and algorithms dedicated to the analysis, visualization and interpretation of high dimensional, genomic data sets. The ISR has also developed and maintains a web-based suite of analytical tools (CRCHXpress) that greatly accelerates the analysis, visualization and interpretation of microarray data of all kinds through the use of an intuitive, point-and-click graphical user interface. Other software tools that are available to investigators include Ingenuity Pathway Analysis for assessing the biological significance gene lists, Pathway Studio for inferring the up- and down-stream effects of a given set of molecules, and Geospiza/GeneSifter for the multi-way statistical analysis of microarray and next-generation sequence datasets. The ISR provides consultation and support on use of genomics and proteomics data repositories such as the Gene Expression Omnibus (GEO) which provides access to data for almost a billion expression measurements in over 4,000 experiments from over 1,000 organisms. The ISR also conducts research and development in new analytical tools and methods that ensure that Center investigators can quickly and effectively exploit the latest technology advances in cancer genomics, proteomics and systems biology.
Resource Description
resource_description
Only available to members of Cancer Research Centers.
Access Restriction(s)
has restriction
has_restriction
true
2010-10-19T21:20:33.924-05:00
awendicke (Annemarie Wendicke)
2011-04-05T13:47:31.486-05:00
workflow state
Published
esegerdell (Erik Segerdell)
Service
service
service offering
Analysis service
analysis service
information content entity
information content entity
continuant
entity
generically dependent continuant